|
|
Publications
(* = corresponding author)
-
Grüber, G.*,
Godovac-Zimmermann, J., and Nawroth, T. (1994) ATP-synthesis
and -hydolysis of the ATP-synthase from Micrococcus
luteus regulated by an inhibitor subunit and membrane
energization.
Biochim. Biophys. Acta 1186, 43-51
-
Grüber, G.*,
Engelbrecht, S., Junge, W., Dose, K., and Nawroth, T. (1994)
Purification and characterization of the inhibitory subunit δ of
the ATP-synthase from Micrococcus luteus.
FEBS Lett. 356, 226-228
-
Grüber, G.,
and Capaldi, R.A. (1996) Differentiation of catalytic sites
on Escherichia coli F1
ATPase by laser photoactivated labeling with [3H] 2-azido-ATP
using the mutant β3Glu381Cys:εSer108Cys to identify different β
subunits by their interactions.
Biochemistry 35, 3875-3879
-
Grüber, G.,
and Capaldi, R.A. (1996) The Trapping of Different
Conformations of the Escherichia coli F1
ATPase by Disulfide Bond Formation: Effect on nucleotide binding
affinities on the catalytic sites.
J. Biol. Chem. 271, 32623-32628
-
Capaldi,
R.A., Aggeler, R., Wilkens, S., and Grüber, G. (1996)
Structural Changes in the γ and ε Subunits of
the Escherichia coli F1FO-type
ATPase During Energy Coupling.
J. Bioenerg. Biomembr. 28, 397-401
-
Grüber, G.,
Hausrath, A., Sagermann, M. and Capaldi, R.A. (1997) An
improved purification of ECF1
and ECF1FO
by using a cytochrome bo-deficient strain of Escherichia coli
facilitates crystallization of these complexes.
FEBS Lett. 410, 165-168
-
Aggeler, R., Grüber, G., and Capaldi, R.A. (1998)
Trapping of conformations of the Escherichia coli F1
ATPase by disulfide bond formation. A state of the enzyme with
all three catalytic sites open and with equal low affinity for
nucleotides.
FEBS Lett. 426, 37-40
-
Svergun, D.I., Aldag, I., Sieck, T., Altendorf, K., Koch,
M.H.J., Kane, D., Kozin, M.B., and Grüber, G.* (1998) A
model of the quaternary structure of the Escherichia coli F1
ATPase from X-ray solution scattering and evidence for
structural changes in the δ subunit during ATP hydrolysis.
Biophys. J. 75, 2212-2219
-
Svergun, D.I., Konrad, S., Huß, M., Koch, M.H.J., Wieczorek, H.,
Altendorf, K., Volkov, V.V., and Grüber, G.* (1998)
Quaternary structure of V1-
and F1
ATPase: significance of structural homologies and diversities.
Biochemistry 37, 17659-17663
-
Rademacher, M., Ruiz, T., Harvey, W.R., Wieczorek, H., and
Grüber, G.* (1999) Molecular Architecture of Manduca
sexta midgut V1
ATPase visualized by electron microscopy.
FEBS Lett. 453, 383-386
-
Wieczorek,
H., Grüber, G., Harvey, W.R., Huss, M., and Merzendorfer,
H. (1999) The plasma membrane H+ V-ATPase from
tobacco hornworm midgut.
J. Bioenerg. Biomembr. 31, 67-74
-
Hausrath, A.C., Grüber, G., Matthews, B.W., and Capaldi,
R.A. (1999) Structural Features of the
g
Subunit of the Escherichia coli F1
ATPase Revealed by a 4.4 Å Resolution Map Obtained by X-ray
Crystallography.
Proc. Natl. Acad. Sci. USA 96, 13697-13702
-
Grüber, G.*,
Rademacher, M., Ruiz, T., Godovac-Zimmermann, J., Canas, B.,
Kleine-Kohlbrecher, D., Huss, M., Harvey, W.R., and Wieczorek, H.
(2000) Three-dimensional structure and subunit topology of
the V1
ATPase from Manduca sexta midgut.
Biochemistry 39, 8609-8616
-
Grüber, G.*,
Svergun, D.I., Godovac-Zimmermann, J., Harvey, W.R., Wieczorek,
H., and Koch, M.H.J. (2000) Evidence for major structural
changes in the Manduca sexta midgut V1
ATPase due to redox-modulation: A small-angle X-ray scattering
study.
J. Biol. Chem. 275, 30082-30087
-
Wieczorek,
H., Grüber, G., Harvey, W. R., Huss, M., Merzendorfer, H.,
and Zeiske, W. (2000) Structure and Regulation of Insect
Plasma Membrane H+ V-ATPase.
J. Exp. Biol. 203, 137-135
-
Svergun, D.I., Becirević, A., Schrempf, H., Koch, M.H.J., and
Grüber, G.* (2000) Solution structure and conformational
changes of the Streptomyces Chitin-Binding Protein (CHB1).
Biochemistry 39, 10677-10683
-
Grüber, G.*
(2000) Structural and Functional Features of the Escherichia
coli F1
ATPase.
J. Bioenerg. Biomembr. 32, 341-346
-
Grüber, G.*,
Svergun, D., Coskun, Ü., Lemker, T., Koch, M. H. J., Schägger,
H., and Müller V. (2001) Structural Insights into the A1 ATPase
from the Archeon, Methanosarcina mazei Gö1.
Biochemistry 40, 1890-1896
-
Radermacher, M., Ruiz, T., Wieczorek, H., and Grüber, G.
(2001) Three-Dimensional Electron Microscopy Reveals The
Structure of The V1-ATPase.
J. Struct. Biol. 135, 26–37
-
Schäfer, H.-J., Coskun, Ü., Eger, O., Godovac-Zimmermann, J.,
Wieczorek, H., Kagawa, Y., and Grüber, G.* (2001)
8-N3-3'-biotinyl-ATP, a novel monofunctional reagent:
Differences of the F1
and V1-ATPases
by means of the ATP analogue.
Biochem. Biophys. Res. Comm. 286, 1218-1227
-
Grüber, G.*,
Wieczorek, H., Harvey, W.R., and Müller, V. (2001)
Structure-Function Relationships of A-, F- and V-ATPases.
J. Exp. Biol. 204, 2597-2605
-
Coskun, Ü., Grüber, G.*, Koch, M.H.J.,
Godovac-Zimmermann, J., Lemker, T., and Müller, V. (2002)
Crosstalk in the A1-ATPase
from Methanosarcina mazei Gö1 due to nucleotide-binding.
J. Biol. Chem. 277, 17327-17333
-
Grüber, G.*,
Godovac-Zimmermann, J., Link, T.A., Coskun, Ü., Rizzo, V.F.,
Betz, C., and Bailer, S.M. (2002) Expression, purification and
characterization of subunit E, an essential subunit of the
vacuolar ATPase.
Biochem. Biophys. Res. Comm. 298, 383-391
-
Rizzo, V.F., Coskun, Ü., Radermacher, M., Ruiz, T., Armbrüster,
A., and Grüber, G.* (2003) Resolution of the V1 ATPase
from Manduca sexta into subcomplexes and visualization of an
ATPase active A3B3EG-complex
by electron microscopy.
J. Biol. Chem. 278, 270-275
-
Müller, V.*,
and Grüber, G.* (2003) ATP synthases: structure
function and evolution of unique secondary energy converters.
Cell Mol. Life Sci., 60, 474-494
-
Lemker, T., Grüber, G., Schmidt, R., and Müller, V. (2003)
Defined subcomplexes of the A1
ATPase from the archaeon Methanosarcina mazei Gö1: biochemical
properties and redox regulation.
FEBS Lett. 544, 206-209
-
Armbrüster, A., Bailer, S. M., Koch, M. H. J.,
Godovac-Zimmermann, J., and Grüber, G.* (2003) Dimer
Formation of subunit G of the Yeast V-ATPase.
FEBS Lett. 546, 395-400
-
Grüber, G.*
(2003) Frontiers in Vacuolar ATPase Research. In: Minireview
Series: V‑type ATPase: News and Views of a Marvelous Ion Pump
(G. Grüber, Series Editor).
J. Bioenerg. Biomembr. 35, 277-280
-
Coskun, Ü., Rizzo, V. F., Koch, M. H. J., and Grüber, G.*
(2004) Ligand-dependent structural changes in the V1
ATPase from Manduca sexta.
J. Bioenerg. Biomembr. 36, 249-256
-
Coskun, Ü., Radermacher, M., Müller, V., Ruiz, T., and Grüber,
G.* (2004) Three-dimensional organization of the archaeal
A1 ATPase
from Methanosarcina mazei Gö1.
J. Biol. Chem. 279, 22759-22764
-
Armbrüster, A., Svergun, D. I., Coskun, Ü., Juliano, S., Bailer,
S., and Grüber, G.* (2004) Structural analysis of the
stalk subunit Vma5p of the Yeast V-ATPase in solution.
FEBS Lett. 570, 119-125
-
Coskun, Ü., Chaban, Y.L., Lingl, A., Müller, V., Keegstra, W.,
Boekema, E.J., and Grüber G.* (2004) Structure and
subunit arrangement of the A-type ATP synthase complex from the
archaeon methanococcus jannaschii visualized by electron
microscopy.
J. Biol.Chem. 279, 38644-38648
-
Chaban, Y.L., Coskun, Ü., Keegstra, W., Oostergetel, G.T.,
Boekema, E.J., and Grüber G.* (2004) Structural
characterization of an ATPase active F1-/V1-ATPase
(α3/β3
E G) hybrid complex.
J. Biol.Chem. 279, 47866-47870
-
Grüber, G.*
(2005) Structural features and nucleotide-binding capability
of the C subunit are integral to the regulation of the
eukaryotic V1VO
ATPases.
Biochem. Soc. Trans. 33,
883-885
-
Chaban, Y. L. Juliano, S., Boekema E. J., and Grüber G.*
(2005) Interaction between subunit C (Vma5p) of the yeast
vacuolar ATPase and the stalk of the C-depleted V1
ATPase from Manduca sexta midgut.
Biochim. Biophys. Acta-Bioenergetics 1708, 106-200
-
Müller, V., Lemker, T., Lingl, A., Weidner, C. Coskun, Ü., and
Grüber, G.* (2005) Bioenergetics of archaea: ATP
synthesis under harsh environmental conditions.
J. Mol. Microbiol. Biotechnol. 10, 167-180
-
Armbrüster, A., Hohn, C., Hermesdorf, A., Schumacher, K.,
Börsch, M., and Grüber G.* (2005) Evidence for Major
Structural Changes in subunit C of the vacuolar ATPase due to
Nucleotide binding.
FEBS Lett. 597, 1961-1977
-
Hong-Hermesdorf, A., Brux, A., Grüber, A., Grüber, G.,
and Schumacher, K. (2006) A WNK kinase binds and
phosphorylates V-ATPase subunit C.
FEBS Lett. 580, 932-939
-
Schäfer, I., Bailer, S. M., Düser, M. G., Börsch, M., Ricardo,
A. B., Stock, D., and Grüber, G.* (2006) Crystal
structure of the archaeal A1AO
ATPsynthase subunit B from Methanosarcina mazei Gö1:
Implications of nucleotide-binding differences in the major A1AO
subunits A and B.
J. Mol. Biol. 358, 725-740
-
Schäfer, I., Rössle, M., Biuković, G., Müller, V., and
Grüber, G.*
(2006)
Structural
and functional analysis of the coupling subunit F in solution
and topological arrangement of the stalk domains of the
methanogenic A1AO
ATPsynthase.
J. Bioenerg. Biomembr. 38, 83-92
-
Biuković, G., Rössle, M., Gayen, S., Mu, Y., and Grüber,
G.*
(2007)
Small-angle X-ray scattering reveals the solution
structure of the peripheral stalk subunit H of the A1AO
ATP synthase from Methanocaldococcus jannaschii and its binding
to the catalytic A subunit.
Biochemistry 46, 2070-2078
-
Hunke, C., Chen, W.-Y., Schäfer, H.-J., and Grüber, G.*
(2007) Cloning, purification, and nucleotide-binding traits
of the catalytic subunit A of the catalytic V1VO
ATPase from Aedes albopictus.
Prot. Expr. Purif. 53, 378-383
-
Gayen, S., Vivekanandan, S., Biuković, G., Grüber, G.*,
and Yoon, H. S. (2007) Backbone 1H, 13C,
and 15N resonance assignments of subunit F of the
A1AO
ATP synthase from Methanosarcina mazei Gö1.
Biomol. NMR Assign. 1, 23-25
-
Thaker, Y. R., Rössle, M., and Grüber, G.*
(2007) The boxing glove shape of subunit d of the yeast
V-ATPase in solution and the importance of disulfide formation
for folding of this protein.
J. Bioenerg. Biomembr. 39, 275-289
-
Gayen, S., Vivekanandan, S., Biuković, G., Grüber, G.*,
and Yoon, H. S. (2007) The NMR solution structure of subunit
F of the methanogenic A1AO
ATP synthase and its interaction with the nucleotide-binding
subunit B.
Biochemistry 46, 11684-11694
-
Luo, D. H., Xu, T., Hunke, C., Grüber, G., Vasudevan, S.
G., and Lescar, J. (2008) Crystal structure of the NS3
protease-helicase from Dengue virus.
J. Virol. 82, 173-183
-
Gayen, S., Balakrishna, A. M., Biuković, G., Yulei, W., Hunke,
C., and Grüber, G.*
(2008) Identification of critical residues
of subunit H in its interaction with subunit E of the A-ATP
synthase from Methanocaldococcus jannaschii.
FEBS J., 1803-1812
-
Rishikesan,
S., Thaker, R. Y., Priya, R., Gayen, S., Manimekalai, M. S. S.,
Hunke, C., and Grüber, G.* (2008) Spectroscopical
identification of residues of subunit G of the yeast V-ATPase in
its connection with subunit E.
Mol. Mem. Biol. 25, 400-410
-
Kumar, A., Manimekalai, M. S. S., and Grüber, G.*
(2008)
Structure of the nucleotide binding subunit B of the
energy producer A1AO
ATP synthase in complex with adenosine diphosphate.
Acta Cryst. D64, 1110–1115
-
Grüber, G.*
and
Marshansky, V. (2008)
New insights into structure-function relationships between
archeal ATP synthase (A1AO)
and vacuolar type ATPase (V1VO
).
BioEssays 30, 1096-1109
-
Priya, R.,
Tadwal, V. S., Rössle, M., Gayen, S., Hunke, C., Peng, W. C.,
Torres, J., and Grüber, G.* (2008) Low resolution
structure of subunit b (b22-156) of Escherichia coli F1FO
ATP synthase
in solution and the b-d assembly.
J. Bioenerg. Biomembr., 40, 245-255
-
Ramalingam,
J. K., Hunke, C., Gao, X., Grüber, G.*, and Preiser, P.R.
(2008) ATP/ADP-binding to a novel nucleotide binding domain
of the reticulocyte binding protein Py235 of Plasmodium yoelii.
J.
Biol. Chem. 283, 36389-36396
-
Kumar, A.,
Manimekalai, M. S. S., Balakrishna, A. M., Hunke, C., Weigelt,
S., Sewald, N., and Grüber, G.* (2009) Spectroscopic
and crystallographic studies of the mutant R416W give insight
into the nucleotide binding traits of subunit B of the A1AO ATP
synthase.
PROTEINS: Structure, Function and Bioinformatics 75, 807-819
-
Manimekalai,
M. S. S., Kumar, A., Balakrishna, A., and Grüber, G.*
(2009)
A second transient position of ATP on its trail to the
nucleotide-binding site of subunit B of the motor protein A1AO
ATP synthase.
J. Struct. Biol. 166, 39-45
-
Rishikesan,
S., Gayen, S., Thaker, R. Y., Vivekanandan, S., Manimekalai, M.
S. S., Yau, Y. H., Greifman Shochat, S., and Grüber, G.*
(2009) Assembly of subunit d (Vma6p) and G (Vma10p) and the
NMR solution structure of subunit G (G1-59) of the Saccharomyces
cerevisiae V1VO
ATPase.
Biochim. Biophys. Acta-Bioenergetics
1787, 242-251
-
Thaker, R. Y., Hunke, C., Yau,
Y. H., Greifman Shochat, S., Ying, L., and Grüber, G.*
(2009)
Association of the eukaryotic V1VO
ATPase subunits a with d and d with A.
FEBS Lett. 583, 1090-1095
-
Biuković, G.,
Gayen, S., Pervushin, K., and Grüber, G.* (2009) The
domain features of the peripheral stalk subunit H of the
methanogenic A1AO
ATP synthase and the NMR solution structure of H1-47.
Biophys. J. 97, 286-294
-
Gayen,
S., Balakrishna, A. M., and Grüber, G.* (2009)
NMR solution structure of the N–terminal domain of subunit E
(E1-52) of A1AO
ATP synthase from Methanocaldococcus jannaschii.
J. Bioenerg. Biomembr. 41, 343-348
-
Priya, R., Biuković, G., Gayen, S., Vivekanandan, S., and
Grüber, G.* (2009)
Solution structure, determined
by nuclear magnetic resonance, of the
b30-82 domain of subunit b of Escherichia coli F1FO
ATP synthase.
J. Bacteriology 191, 7538-7544
-
Kumar,
A., Manimekalai, M. S. S., Balakrishna, A. M.,
Jeyakanthan, J., and Grüber, G.*
(2010)
Nucleotide-binding states of subunit A of the A-ATP synthase
and the implication of P-loop switch in evolution. J.
Mol. Biol. 396, 301-320
-
Hunke, C., Tadwal, V. S., Manimekalai, M. S. S., Rössle, M., and
Grüber, G.*
(2010)
The effect of NBD-Cl in nucleotide-binding of the major subunit
a and B of the motor proteins F1FO
ATP synthase and A1AO
ATP synthase.
J. Bioenerg. Biomembr. 42, 1-10
-
Gayen, S., and
Grüber, G.* (2010)
Disulfide linkage in the coiled-coil domain of subunit H of A1AO
ATP synthase from Methanocaldococcus jannaschii and the NMR
structure of the C-terminal segment H85-104.
FEBS Lett. 584, 713-718
-
Balakrishna, A. M.,
Hunke, C., and Grüber, G.* (2010) Purification and
crystallization of the entire recombinant subunit E of the
energy producer A1AO
ATP synthase.
Acta. Cryst. F66, 324-326
-
Grüber, A., Manimekalai, M. S. S., Balakrishna, A. M., Hunke,
C., Jeyakanthan, J., Preiser, P., and Grüber, G.* (2010)
Structural determination of functional units of the
nucleotide binding domain (NBD94) of the reticulocyte binding
protein Py235 of Plasmodium yoelii.
PLoS ONE 5,
9146-9157
-
Merkulova, M. Bakulina, A., Thaker, Y. R.,
Grüber, G., and Marshansky, V. (2010) Specific motifs
of the V-ATPase a2-subunit isoform interact with catalytic and
regulatory domains of ARNO.
Biochim. Biophys. Acta-Bioenergetics 1797, 1398-1409
-
Raghunathan
D.,
Gayen,
S.,
Grüber, G.*, and Verma, C. (2010)
Crosstalk
along the stalk: Dynamics of the interaction of subunits B and F
in the ATP synthase of Methanosarcina mazei Gö1.
Biochemistry 49, 4181-90
-
Balakrishna, A. M., Manimekalai, M. S. S,. Hunke, C., Gayen, S.,
Rössle, M., Jeyakanthan, J., and Grüber, G.*
(2010) Crystal and solution structure of the C-terminal
part of the Methanocaldococcus jannaschii
A1AO
ATP
synthase subunit E revealed by X-ray diffraction and small-angle
X-ray scattering.
J.
Bioenerg. Biomembr. 42, 311-320
-
Rishikesan,
S.,
Manimekalai, M. S. S., and
Grüber, G.* (2010)
The NMR solution structure of subunit G (G61-101) of the
eukaryotic V1VO
ATPase Saccharomyces cerevisiae.
Biochim.
Biophys. Acta-Biomembranes
1798, 1961-1968
-
Kumar,
A., Manimekalai, M. S. S., Balakrishna, A. M., Priya, R.,
Biuković, G., Jeyakanthan, J., and Grüber, G.* (2010)
The critical roles of residues P235 and F236 of subunit A of
the motor protein A-ATP synthase in P-loop formation and
nucleotide-binding.
J. Mol. Biol. 401,
892-905
-
Merkulova, M., McKee, M., Dip, P. V.,
Grüber, G., and Marshansky, M. (2010)
N-terminal domain of the V-ATPase
a2-subunit displays integral membrane
protein properties.
Protein Science 19, 1850-1862
-
Grüber, A., Manimekalai, M. S. S.,
Preiser, P., and Grüber, G.*
(2010) Crystallographic studies of
the coupling segment NBD94674-781
of the nucleotide binding domain of the
Plasmodium yoelii reticulocyte binding
protein Py235.
Acta. Cryst. F66, 1631-1634
-
Toh, Y. K, Kamariah, N., Maurer-Stroh,
S., Roessle, M., Eisenhaber, F.,
Adhikari, S., Eisenhaber, B and
Grüber, G.* (2011) Structural
insight into the
glycosylphosphatidylinositol
transamidase subunits PIG-K and PIG-S
from yeast.
J. Struct. Biol.
173, 271-281
-
Rose, I., Biuković, G., Aderhold, P.,
Müller, V., Grüber, G.*, and
Averhoff, B. (2011) Identification
and characterization of a unique,
zinc-containing transport ATPase
essential for natural transformation in
Thermus thermophilus HB27.
Extremophiles 15, 191-202
-
Basak, S., Gayen, S., Thaker, Y. R.,
Manimekalai, M. S. S., Roessle, M.,
Hunke, C., and Grüber, G.* (2011)
Solution structure of subunit F
(Vma7p) of the eukaryotic V1VO
ATPase from Saccharomyces cerevisiae
derived from SAXS and NMR spectroscopy.
Biochim. Biophys. Acta-Biomembranes
1808, 360-368
-
Rishikesan, S., Thaker, Y. R., and
Grüber, G.* (2011) NMR Solution
Structure of Subunit E (fragment E1-69)
of the Saccharomyces cerevisiae
V1VO
ATP.
J. Bioenerg.
Biomembr.,
43,
187-193
-
Basak, S., Gayen, S., Ramalingam, J.,
Grüber, A., Preiser, R. P., and Grüber,
G.* (2011) NMR solution structure
of NBD94483-502
of the nucleotide binding domain of the
Plasmodium yoelii reticulocyte binding
protein Py235.
FEMS Microbiol. Letters, 318, 152-158
-
Manimekalai, M. S. S., Kumar, A.,
Jeyakanthan, J., and Grüber, G.*
(2011) The transition-like state and
Pi entrance into the catalytic A subunit
of the biological engine A-ATP synthase.
J. Mol. Biol., 408, 736-754
-
Grüber, A., Gunalan, K., Ramalingam J.
K., Manimekalai, M. S. S., Grüber, G.*,
and Preiser, P. R.* (2011) Structural
characterization of the Erythrocyte
Binding Domain of the Reticulocyte
Binding Protein Homologues family of
Plasmodium yoelii.
Infection
and Immunity, 79, 2880-2885
-
Hunke, C., Antosch, M., Müller, V., and
Grüber, G.* (2011) Binding of
subunit E into the A-B interface of the
A1AO
ATP synthase.
Biochim. Biophys. Acta-Biomembranes,
1808, 2111–2118
-
Kamariah, N., Eisenhaber, F., Adhikari,
S., Eisenhaber, B., and Grüber, G.*
(2011) Purification and
crystallization of yeast
glycosylphosphatidylinositol
transamidase subunit PIG-S
(PIG-S71-467).
Acta. Cryst. F67, 896-899
-
Rishikesan, S., and Grüber, G.*
(2011) Structural elements of the
C-terminal domain of subunit E
(E133-222) from the Saccharomyces
cerevisiae V1VO
ATPase determined by solution NMR
spectroscopy.
J. Bioenerg. Biomembr.
43, 447-455
-
Priya, R., Kumar, A., Manimekalai, M. S.
S., and Grüber, G.* (2011)
Conserved glycine residues in the P-loop
of ATP synthases form a doorframe for
nucleotide entrance.
J. Mol. Biol. 413, 657-666
-
Tadwal, V. S., Manimekalai, M. S. S.,
and Grüber, G.* (2011)
Engineered tryptophan in the adenine
binding site of catalytic subunit A of
the A-ATP synthase demonstrates the
importance of aromatic residues in
adenine binding, forming a tool for
steady state and time-resolved
fluorescence spectroscopy.
Acta Cryst. F67, 1485-1491
-
Raghunathan, D., Gayen, S., Kumar, A.,
Hunke, C., Grüber, G.*, and Verma,
C. (2012) Subunit F modulates ATP
binding and migration in the
nucleotide-binding subunit B of the A1AO
ATP synthase of Methanosarcina mazei Gö1.
J. Bioenerg. Biomembr. 44, 213-224
-
Balakrishna,
A. M., Hunke, C., and Grüber, G.*
(2012)
The structure of subunit E of the
Pyrococcus horikoshii OT3 A-ATP synthase
gives insight into the elasticity of the
peripheral stalk.
J. Mol. Biol.,
420, 155-163
-
Dip, P. V., Saw, W. G., Roessle, M.,
Marshansky, V., and Grüber, G.*
(2012) Solution structure of subunit
a, a104-363, of the Saccharomyces
cerevisiae V-ATPase and the importance
of its C-terminus in structure
formation.
J. Bioenerg. Biomembr. 44, 341-350
-
Grüber, A., Manimekalai, M. S. S.,
Preiser, P. R., and Grüber, G.*
(2012) Structural architecture and
interplay of the nucleotide- and
erythrocyte binding domain of the
reticulocyte binding protein Py235 from
Plasmodium yoelii.
Internat. J. Parasitol.
42, 1083-1089
-
Basak, S., Balakrishna, A. M.,
Manimekalai, M. S. S., and Grüber,
G.* (2012) Crystallization and
preliminary X-ray crystallographic
analysis of subunit F, F1-94,
an essential coupling subunit of the
eukaryotic V1VO
ATPase from Saccharomyces cerevisiae.
Acta Cryst. F68, 1055-1059
-
Tadwal, V. S., Sundararaman, L.,
Manimekalai, M. S. S., Hunke, C., and
Grüber, G.* (2012) Relevance of
the conserved histidine and asparagine
residues in the phosphate-binding loop
of the nucleotide binding subunit B of A1AO
ATP synthases.
J. Struct. Biol.
180, 509-518
-
Zhang, Q., Hunke, C., Yau, Y. H., Seow,
V., Lee, S., Tanner, L. B., Guan, X. L.,
Wenk, M. R., Fibriansah, G., Chew, P.
L., Kukkaro, P., Biuković, G., Shi, P.
Y., Shochat, S. G., Grüber, G.,
Lok, S. M. (2012) The stem region of
premembrane protein plays an important
role in the virus surface protein
rearrangement during dengue maturation.
J. Biol.
Chem. 287, 40525-40534
-
Cs, J. H., Rydstrom, A., Manimekalai, M.
S. S., Svanborg, C., and Grüber, G.* (2012)
Low resolution
solution structure of HAMLET and the
importance of its alpha-domains in
tumoricidal activity.
PLoS ONE 7, e53051
-
Biuković, G., Basak, S., Manimekalai, M.
S. S., Rishikesan, S., Roessle, M.,
Dick, T., Rao, S., Hunke, C., and Grüber, G.* (2013)
Variations of
subunit ɛ of the Mycobacterium
tuberculosis F1FO
ATP synthase and a novel model for
mechanism of action of the TB drug
TMC207.
Antimicrob. Agents Chemother. 57,
168-176
-
Priya, R., Biuković, G., Manimekalai, M.
S. S., Lim, J., Rao, S. P. S., and Grüber, G.* (2013)
Solution
structure of subunit γ (γ1-204) of the
Mycobacterium tuberculosis F-ATP
synthase and the unique loop of
γ165-178, representing a novel TB drug
target.
J. Bioenerg. Biomembr.
45, 121-129
-
Hosokawa, H., Dip, P. V., Merkulova, M.,
Zhuang, Z., Khatri, A., Jian, X.,
Keating, S. M., Bueler, S. A.,
Rubinstein, J. L., Randazzo, P. A.,
Ausiello, D. A., Grüber, G., and
Marshansky, M. (2013) N-terminal part
of a-subunit isoforms is involved in
signaling between V-ATPase and
Cytohesin-2.
J. Biol.
Chem. 288, 5896-5913
-
Saw, W. G.,
Eisenhaber, B., Eisenhaber, F., and Grüber, G.* (2013)
Low resolution structure of the soluble domain GPAA1
(yGPAA170-247) of the glycosylphosphatidylinositol transamidase
subunit GPAA1 from Saccharomyces cerevisiae.
Biosci.
Rep. 33, e00033
-
Alag, R.,
Balakrishna, A. M., Rajan, S., Qureshi, I., Shin, J., Lescar,
J., Grüber, G., and Yoon, H. S. (2013) Structural
insights into substrate binding by PvFKBP35, a peptidylprolyl
cis-trans isomerase from the human malarial parasite Plasmodium
vivax.
Eukaryotic Cell 12, 627-634
-
Basak, S.,
Lim, J., Manimekalai, M. S. S., Balakrishna, A. M., and
Grüber, G.* (2013) Crystal- and NMR structures give
insights into the role and dynamics of subunit F of the
eukaryotic V-ATPase from Saccharomyces cerevisiae.
J. Biol. Chem.
288, 11930-11939
-
Dutt
Konar,A., Vass, E. Hollósi, M., Majer, Z., Grüber, G.,
Frese,, K., and Sewald, N. (2013) Conformational Properties
of Secondary Amino Acids: Replacement of Pipecolic Acid by
N-Methyl Alanine in Efrapeptin C.
Chem.
Biodivers. 10, 942-951
-
Salzer, R.
Herzberg, M., Nies, D., Biuković, G., Grüber, G., Müller,
V., and Averhoff, B. (2013) The DNA uptake ATPase PilF of
Thermus thermophilus: a reexamination of the zinc content.
Extremophiles
17, 697-698
-
Srinivasaraghavan, K., Nacro, K.,
Grüber, G., and Verma,
C. (2013) Effect of Ser392 Phosphorylation on Structure and
Dynamics of PB domain of ARNO protein: A Molecular Simulations
study.
Biochemistry 52,
7339-7349
-
Balakrishna,
A. M., Seelert, H., Marx, S.-H. Dencher, N.A., and Grüber,
G.* (2014) Crystallographic structure of the turbine
c-ring from spinach chloroplast F-ATP synthase.
Biosci. Rep.
34, e00102
-
Marshansky,
V., Rubinstein, J. and Grüber, G. (2014) Eukaryotic V-ATPase:
Novel structural findings and functional insights.
Biochim. Biophys. Acta-Bioenergetics
1837, 857-879
-
Grüber,
G.*, Manimekalai, M. S. S., Mayer, F. and Müller, V. (2014)
ATP synthases from archaea: The beauty of a molecular motor.
Biochim. Biophys. Acta-Bioenergetics
1837, 940-952
-
Eisenhaber,
B., Eisenhaber, S., Toh, Y. K, Grüber, G., and Eisenhaber,
F. (2014) Transamidase subunit GAA1/GPAA1 is a M28 family
metallo- peptide-synthetase that catalyzes the peptide bond
formation between the substrate protein's omega-site and the GPI
lipid anchor's phosphoethanolamine.
Cell
Cycle 13, 1912-1917
-
Dip, P. V.,
Kamariah, N., Manimekalai, M. S. S., Nartey, W., Balakrishna, A.
M., Eisenhaber, F., Eisenhaber, B. and Grüber, G.* (2014)
Structure, mechanism and ensemble
formation of the Alkylhydroperoxide Reductase subunits AhpC and
AhpF from Escherichia coli.
Acta
Crystallogr. D70, 2848-2862
-
Dip, P. V.,
Kamariah, N., Nartey, W., Beushausen, C., Kostyuchenko, V. A.,
Ng, T. S., Lok, S. M., Saw, W. G., Eisenhaber, F., Eisenhaber,
B. and Grüber, G.* (2014) Key roles for the
Escherichia coli AhpC C-terminus in assembly and catalysis of
alkylhydroperoxide reductase, an enzyme essential for the
alleviation of oxidative stress.
Biochim. Biophys. Acta
1837, 1932-1943
-
Wei, L.,
Jiang, P., Manimekalai, M. S. S., Hunke, C., Grüber, G.,
Pervushin, K. and Mu, Y. (2015) Extended structure of rat
islet amyloid polypeptide in solution.
Adv. Exp. Med.
Biol., Dongqing Wei et al. (Eds): Advance in Structural
Bioinformatics 827, 85-92
-
Balakrishna,
A. M., Basak, S., Manimekalai, M. S. S., and Grüber, G.*
(2015) Crystal structure of subunits D and F in complex give
insight into energy transmission of the eukaryotic V-ATPase from
Saccharomyces cerevisiae.
J.
Biol. Chem. 290, 3183-3196
-
Tay, M. Y.
F., Saw, W. G., Zhao, Y., Chan, W. K. K., Singh, D, Chong, Y.,
Forwood, J. K., Ooi, E. E., Grüber, G., Lescar, J., Luo,
D., and Vasudevan, S. G. (2015) The C-terminal 50 amino acid
residues of Dengue NS3 protein are important for NS3-NS5
interaction and viral replication.
J. Biol. Chem.
290, 2379-2394
-
Ho, J., Sielaff, H., Nadeem, A., Svanborg, C. and Grüber, G.*
(2015) The molecular motor F-ATP synthase is targeted by the
tumoricidal protein HAMLET.
J. Mol. Biol.
427, 1866-1874
-
Grüber,
G.* (2015) The Beauty of a Visualized Peroxo-diiron(III)
Intermediate.
Structure
23, 805-806
-
Rajan, S.,
Choi, M., Nguyen, Q.T., Ye, H., Liu, W., Toh, H.T., Kang, C.B.,
Kamariah, N., Li, C., Huang, H., White, C., Baek, K., Grüber,
G., and Yoon, H.S. (2015) Structural transition in Bcl-xL
and its potential association with mitochondrial calcium ion
transport. Scientific Rep.
5, 10609
-
Balakrishna,
A. M., Manimekalai, M. S. S., and Grüber, G.* (2015)
Protein-protein interactions within the ensemble, Eukaryotic V-ATPase,
and its concerted interactions with cellular machineries.
Progr. Biophys. Mol. Biol.
119, 84-93
-
Kamariah,
N., Manimekalai, M. S. S., Nartey, W., Eisenhaber, F.,
Eisenhaber, B. and Grüber, G.* (2015) Crystallographic
and solution studies of NAD+- and NADH-bond Alkylhydroperoxide
Reductase subunit F (AhpF) from Escherichia coli provide insight
into sequential enzymatic steps.
Biochim. Biophys. Acta-Bioenergetics
1847, 1139-1152
-
Nartey, W., Basak, S., Kamariah, N., Manimekalai, M. S. S.,
Robson, S., Wagner, G., Eisenhaber, B., Eisenhaber, F. and
Grüber, G.* (2015)
NMR studies
reveal a novel grab and release mechanism necessary for
efficient catalysis of the bacterial 2-Cys peroxiridoxin
machinery.
FEBS J. 282,
4620-4638
-
Saw, W. G.,
Tria, G., Grüber, A., Manimekalai, M. S. S., Zhao, Y., Chandramohan, A., Anand, G. S., Matsui, T., Weiss, T., Vasudevan,
S. and
Grüber, G.* (2015)
Structural insight and flexibility features of NS5 proteins from
all four serotypes of Dengue virus in solution.
Acta
Crystallogr. D71, 2309-2327
-
Kamariah,
N., Nartey, W., Eisenhaber, B., Eisenhaber, F., and Grüber,
G.* (2016) Low resolution solution structure of an
enzymatic active AhpC10:AhpF2 ensemble of
the Escherichia coli Alkylhydroperoxide Reductase.
J. Struct. Biol.
193, 13-22
-
Singh, D.,
Sielaff, H., Sundararaman, L., Bhushan, S. and Grüber, G.*
(2016) The stimulating role of subunit F in ATPase activity
inside the A1-complex of the Methanosarcina mazei Gö1 A1AO ATP
synthase.
Biochim. Biophys. Acta-Bioenergetics
1857, 177-187
-
Hu, L.,
Miao, J.* and Grüber, G.* (2016) Disk-Like Nanojets
with Steerable Trajectory Using Platinum Nozzle Nanoengines.
RSC Advances 6,
3399-3405
-
Marshansky,
M., Futai, M., and Grüber, G. (2016) Eukaryotic V-ATPase
and its super complexes: From structure and function to disease
and drug targeting. Series “Advances in Biochemistry in Health
and Disease”, (Edited by Sajal Chakraborti and Naranjan S.
Dhalla) Book: “Regulation of Ca2+-ATPases, V-ATPases and F-ATPases”.
Springer, New York,
DOI: 10.1007/978-3-319-24780-9_16, pages 301-335
-
Hotra, A.,
Suter, M., Biuković, G., Ragunathan, P., Kundu, S., Dick, T. and
Grüber G.* (2016) Deletion of a unique loop in the
mycobacterial F-ATP synthase γ subunit sheds light in its
inhibitory role in ATP hydrolysis driven H+-pumping.
FEBS J. 283,
1947-1961
-
Liu, W.,
Zhang, J., Fan, J.-S., Tria, G., Grüber, G. and Yang, D.
(2016) A new method for determining structure ensemble of
multi-domain protein: Application to a RNA binding protein.
Biophys. J.
110, 1943-1956
-
Manimekalai,
M.S.S., Saw, W. G., Pan, A., Grüber, A. and Grüber, G.*
(2016) Identification of the critical linker residues
conferring differences in compactness of DENV-4 NS5 from Dengue
virus serotypes 1-3.
Acta Crystallogr. D72,
795-807
-
Kumar, A.,
Balakrishna, A. M., Nartey, W., Manimekalai, M. S. S., and
Grüber, G.* (2016) Redox chemistry of Mycobacterium
tuberculosis alkylhydroperoxide reductase E (AhpE): Structural
and mechanistic insight into a mycoredoxin-1 independent
reductive pathway of AhpE via mycothiol.
Free Rad. Biol. Med.
97, 588-601
-
Kundu, S.,
Biuković, G., Grüber, G. and Dick, T. (2016)
Bedaquiline targets the ε subunit of mycobacterial F-ATP
synthase. Antimicrob. Agents
Chemother. 60, 6977-6979
-
Sielaff,
H., Martins, J. Singh, D., Biuković, G., Grüber, G.*,
Frasch, W.* (2016) Power Stroke Angular Velocity Profiles of
Archaeal A-ATP synthase versus Thermophilic and Mesophilic F-ATP
synthase Molecular Motors.
J. Biol, Chem.
291, 25351-35363
-
Hu, L.,
Tao, K., Miao, J. and Grüber, G. (2016)
Hydrogen-peroxide-fuelled platinum-nickel-SU-8 microrocket with
steerable propulsion using eccentric nanoengine.
RSC Advances 6,
102513 – 102518
-
Kamariah,
N., Sek, M.F., Eisenhaber, B., Eisenhaber, F. and Grüber, G.*
(2016) Transition steps in peroxide reduction and a molecular
switch for peroxide robustness of prokaryotic peroxiredoxins.
Sci. Rep. 6, 37610
-
Hu, L.,
Miao, J. and Grüber, G. (2017) Temperature effects on
disk-like gold-nickel-platinum nanoswimmer's propulsion fuelled
by hydrogen peroxide.
Sens. Actuators B Chem.
239, 586-596
-
Saw, W. G.,
Pan, A.,
Manimekalai, M.S.S. and Grüber, G.* (2017) Structural
features of Zika virus non-structural proteins 3 and -5 and its
individual domains in solution as well as insights into NS3
inhibition.
Antiviral Res. 141, 73-90
-
Singh, D.,
Sielaff, H., Börsch, M.*, and Grüber, G.* (2017)
Dynamics of subunit F in the A3B3DF-complex of Methanosarcina
mazei Gӧ1 A-ATP synthase monitored by single-molecule FRET.
FEBS Letters
591, 854-862
-
Zhu, G.,
Saw, W. G., Nalaparaju, A., Grüber, G. and Lu L. (2017)
Coarse-Grained Molecular Modeling of Solution Structure
Ensemble of Dengue Virus Non-Structural Protein 5 with
Small-Angle X-Ray Scattering Intensity.
J. Phys.
Chem. B. 121, 2252-2264
-
Kamariah,
N., Eisenhaber, B., Eisenhaber, F. and Grüber, G.* (2017)
Essential role of the flexible linker on the conformational
equilibrium of bacterial peroxiredoxin reductase for effective
regeneration of peroxiredoxin.
J. Biol.
Chem. 292, 6667-6679
-
Pan, A.,
Saw, W.G., Manimekalai, M.S.S., Grüber, A., Shin, J., Matsui,
T., Weiss, T. and Grüber, G.* (2017) Structural
features of NS3 of Dengue virus serotypes 2 and 4 in solution
and insight into RNA binding and the inhibitory role of
quercetin.
Acta Crystallogr. D73,
402-419
-
Kumar, A.,
Nartey, W., Shin, J., Manimekalai, M. S. S., and Grüber, G.*
(2017) Structural and mechanistic insights into Mycothiol
Disulphide Reductase and the Mycoredoxin-1-alkylhydroperoxide
reductase E assembly of Mycobacterium tuberculosis.
Biochim. Biophys. Acta-General Subject
1861, 2354-2366
-
Ragunathan,
P, Sielaff, H., Sundararaman, L., Biuković, G., Manimekalai,
M.S.S., Singh, D., Kundu, S., Wohland, T., Frasch, W., Dick, T.
and Grüber, G.* (2017) The uniqueness of subunit α of
mycobacterial F-ATP synthases: An evolutionary variant for niche
adaptation.
J. Biol. Chem.
292, 11262-11279
-
Kalia, N.P.,
Hasenoehrl, E.J., Ab Rahman, N.B., Koh, V.H., Ang, M.L., Sajorda,
D.R., Hards, K., Grüber, G., Alonso, S., Cook, G.M.,
Berney, M., and Pethe, K. (2017) Exploiting the synthetic
lethality between terminal respiratory oxidases to kill
Mycobacterium tuberculosis and clear host infection.
Proc. Natl. Acad. Sci. USA
114, 7426-7431
-
Wong, C.F.,
Shin, J., Manimekalai, M.S.S., Saw, W.G., Zhan, Y., Bhushan, S.
Kumar, A., Ragunathan, P. and Grüber, G.* (2017) The
uniqueness of AhpC of the mycobacterial antioxidant defense
system and its interaction with its reducing partner Thioredoxin-C.
Sci. Rep.
7, 5159
-
Singal, B.,
Balakrishna, A., Nartey, W., Manimekalai, M.S.S., Jeyakanthan,
J. and Grüber, G.* (2017) Crystallographic and
solution structure of the N-terminal domain of the Rel protein
from Mycobacterium tuberculosis.
FEBS Letters
591, 2323-2337
-
Toh, Y.K.,
Balakrishna, A.M., Manimekalai, M.S.S., Chionh, B.B.,
Seetharaman, R.R.C., Eisenhaber, B., Eisenhaber, F. and
Grüber, G.* (2017) Novel insights into the vancomycin-resistant
Enterococcus faecalis (V583) alkylhydroperoxide reductase
subunit F.
Biochim. Biophys. Acta-General Subject
1861, 3201-3214
-
Gopal, P.,
Nartey, W., Ragunathan, P., Sarathy, J., Kaya, F., Yee, M.,
Setzer, C., Manimekalai, M.S.S., Dartois, V., Grüber, G.
and Dick, T. (2017) Pyrazinoic acid inhibits mycobacterial
coenzyme A biosynthesis by binding to aspartate decarboxylase
PanD.
ACS
Infect Dis. 2017, 3, 807-819
-
Cai, H., Gabryelczyk, B., Manimekalai, M.S.S., Grüber, G.,
Salentinig, S. and Miserez, A. (2017) Self-Coacervation of
Modular Squid Beak Proteins – A Comparative Study.
Soft Matter 13,
7740-7752
-
Singh, D.
and Grüber, G.* (2018) Crystallographic and enzymatic
insights into the mechanisms of Mg-ADP inhibition in the A1
complex of the A1AO
ATP synthase.
J. Struct.
Biol. 201, 26-35
-
Liu, C.,
Liew, C.W., Wong, Y.H., Tan, S.T., Poh, W., Manimekalai, M.S.S.,
Rajan, S., Xin, L., Liang, Z.-X., Grüber, G., Rice, S.
and Lescar, J. (2018) Insights into biofilm dispersal
regulation from the crystal structure of the PAS-GGDEF-EAL
region of RbdA from Pseudomonas aeruginosa.
J. Bacteriol.
200, e00515-00517
-
Pan, A.,
Balakrishna, A.M., Nartey, W., Kohlmeier, A., Dip, P.V., Bhushan,
S., Grüber, G.* (2018) Atomic structure and enzymatic
insights into the vancomycin-resistant Enterococcus faecalis
(V583) alkylhydroperoxide reductase subunit C.
Free Rad. Biol. Med.
115, 252-265
-
Beldar, S.,
Manimekalai, M.S.S., Cho, N.J., Baek, K., Grüber, G. and
Yoon, H.S. (2018) Self-association and conformational
variation of NS5A domain 1 of hepatitis C virus.
J. Gen. Virol.
99, 194-208
-
Kumar, A.,
Manimekalai, M.S.S., and Grüber, G.* (2018) Substrate-induced
structural alterations of Mycobacterial mycothiol disulphide
reductase and critical residues involved.
FEBS Lett.
592, 568-585
-
Shin, J.,
Ragunathan, P., Sundararaman, L., Nartey, W., Kundu, S.,
Manimekalai, M.S.S., Bogdanović, N., Dick, T. and Grüber, G.*
(2018) The NMR solution structure of Mycobacterium
tuberculosis F-ATP synthase subunit ε provides new insight into
energy coupling inside the rotary engine.
FEBS J. 285,
1111-1128
-
Kamariah,
N., Eisenhaber, B., Eisenhaber, F. and Grüber, G.* (2018)
Active site CP-loop dynamics modulate substrate binding,
catalysis, oligomerization, stability, over-oxidation and
recycling of 2-Cys Peroxiredoxins.
Free Rad. Biol. Med.
118, 59-70
-
Boon, P.L.S.1,
Saw, W.G.1, Lim, X.X.1, Raghuvamsi, P.V., Huber, R.G., Marzinek,
J.K., Holdbrook, D.A., Ganesh, S.A., Grüber, G.* and
Bone, P.J. (2018) Partial Intrinsic Disorder Governs the
Dengue Capsid Protein Conformational Ensemble.
ACS Chem
Biol. DOI: 10.1021/acschembio.8b00231
-
Kamariah,
N., Eisenhaber, B., Eisenhaber, F. and Grüber, G.* (2018)
Molecular mechanism of the Escherichia coli AhpC in the
function of a chaperone under heat-shock conditions.
Sci. Rep.
8, 14151
-
Sielaff,
H., Singh, D., Grüber, G.* and Börsch, M.* (2018)
Analyzing conformational changes in single FRET-labeled A1
parts of archaeal A1AO-ATP synthase.
Proc. SPIE 105007;
DOI: 10.1117/12.2286785
-
Bogdanović,
N, Sundararaman, L., Kamariah, N., Tyagi, A., Bhushan, S.,
Ragunathan, P., Shin, J., Dick, T., and Grüber, G.*
(2018) Structure and function of Mycobacterium-specific
components of F-ATP synthase subunits α and ε.
J. Struct.
Biol. 280, 420-434
-
Scherr, N.,
Bieri, R., Thomas, S., Chauffour, A., Kalia, N.P., Schneide, P.,
Ruf, M.-T., Lamelas, A., Manimekalai, M.S.S., Grüber, G.,
Ishii, N., Suzuki, K., Tanner, M., Moraski, G.C. Miller, M.J.,
Witschel, M., Jarlier, V., Pluschke, G., and Pethe, K. (2018)
Targeting the Mycobacterium ulcerans cytochrome bc1:aa3 for the
treatment of Buruli ulcer.
Nature Commun.
9, 5370
-
Saw, W.G.1,
Pan, A.1,
Manimekalai, M.S.S., Grüber, A., and Grüber, G.* (2019)
Structure and flexibility of Non-structural proteins 3 and -5
of Dengue- and Zika viruses in solution.
Progr. Biophys. Mol. Biol.
143, 67-77
-
Zhu, G.,
Pan, A., Grüber, G. and Lu, L. (2019) Conformational
States of Zika Virus Non-Structural Protein 3 Determined by
Molecular Dynamics Simulations with Small-Angle X-Ray Scattering
Data.
Progr. Biophys. Mol. Biol.
143, 13-19
-
Marshansky,
V., Hosokawa, H., Merkulova, M., Bakulina, A., Bjargava, A.,
Tonra, J., Dip, P.V., Thaker, Y.R., and Grüber, G. (2019)
Structural model of a2-subunit N-terminus and its binding
interface for Arf-GEF CTH2: Implication for regulation of V-ATPase,
CTH2 function and rational drug design.
Curr. Top. Membr. 83, 77-106
-
Bogdanović,
N., Trifunovic, D., Sielaff, H., Westphal, L., Bhushan, S.,
Müller, V. and Grüber, G.* (2019) The structural
features of Acetobacterium woodii F-ATP synthase reveal the
importance of the unique subunit γ-loop in Na+
translocation and ATP synthesis.
FEBS J. 286,
1894-1907
-
Ng, I.H.W.,
Chan, K., Tan, M.J.A., Gwee, C.P., Smith, K.M., Jeffress, S.J.,
Saw, W.G., Swarbrick, C.M.D., Watanabe, S., Jans, D., Grüber,
G., Forwood, J.K. and Vasudevan, S.G. (2019) Zika virus
NS5 forms supramolecular nuclear bodies that sequester importin
alpha and modulate the host immune and pro-inflammatory response
in neuronal cells.
ACS
Infect. Dis. 2019, 5, 932-948
-
Toh, Y.K.,
Balakrishna, A., Shin, J., Neelagandan, K., Grüber, A.,
Eisenhaber, F., Eisenhaber, B. and Grüber, G.* (2019)
Effect of the additional cysteine 503 of vancomycin-resistant
Enterococcus faecalis (V583) alkylhydroperoxide reductase
subunit F (AhpF) and the mechanism of AhpF and subunit C
assembling.
Free Rad. Med. Biol.
138, 10-22
-
Saw, W.G.,
Chan, K., Vasudevan, S.G. and Grüber, G.* (2019) Zika
virus non-structural protein 5 residue 681 is critical for dimer
formation and enzymatic activity.
FEBS Lett.
593, 1272-1291
-
Kamariah,
N., Huber, R.G., Nartey, W., Bhushan, S., Bond, P.J. and Grüber,
G.* (2019) Structure and subunit arrangement of Mycobacterial
F1FO
ATP synthase and novel features of the unique mycobacterial
subunit δ.
J. Struct. Biol.
207, 199-208
-
Sarathy,
J., Ragunathan, P., Shin, J., Cooper, C., Upton, A., Grüber,
G.*, and Dick, T.* (2019) TBAJ-876 retains Bedaquiline’s
activity against subunit c and ε of Mycobacterium tuberculosis
F-ATP synthase.
Antimicrob.
Agents Chemother. 63, e01191-19
-
Kannaian
B., Sharma, B., Phillips, M., Chowdhury, A., Manimekalai, M.S.S.,
Adav, S.S., Ng, J.T.Y, Kumar, A., Lim, S., Mu, Y., Sze, S.K.,
Grüber, G., and Pervushin, K. (2019) Abundant
neuroprotective chaperone Lipocalin-type prostaglandin D
synthase (L-PGDS) disassembles the Amyloid-β fibrils.
Sci. Rep.
9, 12579
-
Sorayah,
R., Manimekalai, M.S.S., Shin, S.J., Koh, W-J., Grüber, G.,
and Pethe, K. (2019) Naturally-occurring polymorphisms in
QcrB are responsible for resistance to Telacebec in
Mycobacterium abscessus.
ACS Infect. Dis.
2019, 5, 2055-2060
-
Saw, W.-G.1,
Wu, M.-L1,
Ragunathan, P.1,
Biuković, G, Lau, A.-M., Shin, J., Harikishore, A., Cheung,
C.-Y., Hards, K., Sarathy, J., Bates, R. W., Cook, G. M. C.,
Dick, T.*, and Grüber, G.* (2019) Disrupting coupling
within mycobacterial F-ATPsynthase subunit ε causes dysregulated
energy production and cell wall biosynthesis.
Sci. Rep.
9, 16759
-
Gopal, P.,
Grüber, G., Dartois, V., and Dick, T. (2019)
Pharmacological and molecular mechanisms behind the sterilizing
activity of Pyrazinamide.
Trends Pharmacol. Sci.
40, 930-940
-
Sarathy,
J., Grüber, G., and Dick, T. (2019) Re-understanding
the mechanisms of action of the anti-mycobacterial drug
Bedaquiline.
Antibiotics
8, 261
-
Kamariah,
N., Ragunathan, P., Shin, J., Saw, W.-G., Wong, C.F., Dick, T.,
and Grüber, G.* (2020) Unique structural and
mechanistic properties of mycobacterial F-ATP synthases:
Implications for drug design.
Prog.
Biophys. Mol. Biol. 152, 64-73
-
Saw, W.-G.,
Wong, C.-F., Dick, T., Grüber, G.* (2020) Overexpression, purification, enzymatic and microscopic
characterization of recombinant mycobacterial F-ATP synthase.
Biochem. Biophys. Res. Comm.
522, 374-380
-
Sarathy,
J., Ragunathan, P., Cooper, C., Upton, A., Grüber, G.*,
and Dick, T.* (2020) TBAJ-876 displays Bedaquiline-like
mycobactericidal potency without retaining the parental drug’s
uncoupler activity.
Antimicrob. Agents Chemother.
64, e01540-19
-
Harikishore,
A., Chong, S. S. M., Ragunathan, P., Bates, R. W., and Grüber,
G.* (2020) Targeting the menaquinol binding loop of
mycobacterial cytochrome bd oxidase.
Mol. Div.,
doi: 10.1007/s11030-020-10034-0
-
Grüber,
G.* (2020) Introduction: Novel insights into TB research
and drug discovery.
Prog.
Biophys. Mol. Biol. 152, 2-5
-
Chong, S.
S. M., Manimekalai, M.S.S., Sarathy, J., Williams, Z., Harold,
L., Cook, G.M.C., Dick, T., Pethe, K., Bates, R.W., and Grüber, G.* (2020)
Anti-tuberculosis activity of the
anti-malaria cytochrome bcc oxidase inhibitor SCR0911.
ACS
Infect. Dis. 6, 725-737
-
Gopal, P.,
Sarathy, J., Yee, Y., Ragunathan, P., Shin, J., Bhushan, S.,
Zhu, J., Akopian, T., Kandror, O., Lim, T.K., Gengenbacher, M.,
Lin, Q., Rubin, E.J., Grüber, G., and Dick, T. (2020) Pyrazinamide triggers degradation of its target aspartate
decarboxylase.
Nature Commun. 11, 1661
-
Kamariah,
N., Huber, R.G., Bond, P.J., Müller, V., and Grüber, G.*
(2020) 3D reconstruction and flexibility of the hybrid engine
Acetobacterium woodii F-ATP synthase.
Biochim.
Biophys. Res. Comm. 527, 518-524
-
Hotra, A.,
Ragunathan P., Ng, P.S., Seankongsuk, P., Harikishore, A.,
Sarathy, J.P., Saw, W.-G., Lakshmanan, U., Sae-Lao, P., Kalia,
N.P., Shin, J., Kalyanasundaram, R., Anbarasu, S., Parthasarathy,
K., Pradeep, C.N., Makhija, H., Dröge, P., Poulsen, A., Tan,
J.H.L., Pethe, K., Dick, T., Bates, R.W., and Grüber, G.* (2020)
Discovery of a novel Mycobacterial F-ATP synthase inhibitor and
its potency in combination with diarylquinolines.
Angewandte
Chemie i.Ed, 132, 13397-13406
-
Sviriaeva,
E., Manimekalai, M.S.S., Grüber, G.*, and Pethe, K.* (2020)
Features and functional importance of key residues of the
Mycobacterium tuberculosis cytochrome bd oxidase.
ACS
Infect. Dis. 6, 1697-1707
-
Chong, S.
S. M., Kamariah, N., and Grüber, G.* (2020) Residues
of helix ɑ2 are critical for catalytic efficiency of mycobacterial
alkylhydroperoxide reductase subunit C.
FEBS Lett.
594, 2829-2839
-
Wong,
C.-F., and Grüber, G.* (2020) The unique C-terminal extension
of mycobacterial F-ATP synthase subunit α is the major
contributor to its latent ATP hydrolysis activity.
Antimicrob.
Agents and Chemother. 64, e01568-20
-
Shin, J.,
Singal, B., Manimekalai, M.S.S., Chen, M.W., Ragunathan, P., and
Grüber, G.* (2020) Atomic structure of, and valine
binding to the regulatory ACT domain of the Mycobacterium
tuberculosis Rel protein.
FEBS J. 288,
2377-2397
-
Wong,
C.-F., Lau, A.-M., Harikishore, A., Saw, W.-G., Shin J.,
Ragunathan, P., Bhushan, S., Ngan, S. F. C., Sze, S. K., Bates,
R.W., Dick, T., and Grüber, G.* (2021) A systematic
assessment of mycobacterial F1-ATPase subunit ε’s role in latent
ATPase hydrolysis.
FEBS J. 288,
818-836
-
Lee, B.S.,
Hards, K., Engelhart, C.A., Hasenoehrl, E.J., Kalia, N.P.,
Mackenzie, J.S., Sviriaeva, E., Chong, S.M.S., Manimekalai, M.S.S., Koh, V.H., Chan, J., Xu, J., Alonso, S., Miller, M.J.,
Steyn, Grüber, G., Schnappinger, D., Berney, M., Cook,
G.M., Moraski, G.C., and Pethe, K. (2021) Dual inhibition of
the terminal oxidases eradicates antibiotic-tolerant
Mycobacterium tuberculosis.
EMBO Mol.
Med., e13207
-
Qiao, Z.,
Lampugnani, E., Yan, X.-F., Khan, G., Saw, W.G., Hannah, P.,
Qian, F., Calabria, J. Miao, J., Grüber, G., Persson, S.,
and Gao, Y.G. (2021) Crystal structure of Arabidopsis CESA3
catalytic domain with UDP-Glucose provides insight into the
mechanism of cellulose synthesis.
Proc. Natl.
Acad. Sci. USA 118, e2024015118
-
Ragunathan,
P., Cole, M., Latka, C., Aragaw, W.W., Hegde, P., Joon, S.,
Manimekalai, M.S.S., Rishikesan, S., Aldrich, C., Dick, T., and
Grüber, G.* (2021) Mycobacterium tuberculosis PanD
structure-function analysis and identification of a potent
pyrazinoic acid-derived enzyme inhibitor.
ACS Chem. Biol.16,
1030-1039
-
Shin, J.,
Singal, B., Grüber, A., Wong, M.K.D., Ragunathan, P., and
Grüber, G.* (2021) Atomic structure of the TGS domain of
Rel protein from Mycobacterium tuberculosis and its interaction
with deacylated tRNA.
FEBS Lett.
595, 3006-3018
-
Harikishore,
A., Wong, C.-F., Ragunathan, P., Litty, D., Müller, V., and
Grüber, G.* (2021) Targeting mycobacterial F-ATP synthase
C-terminal α subunit interaction motif on rotary subunit γ.
Antibiotics 10, 1456
-
Harikishore,
A., Saw, W.-G., Ragunathan, P., Litty, D., Dick, T., Müller, V.,
and Grüber, G.* (2022) Mutational analysis of
mycobacterial F-ATP synthase subunit δ leads to a potent δ
enzyme inhibitor.
ACS Chem. Biol.
17, 529-535
-
Ragunathan,
P., Dick, T., and Grüber, G.* (2022)
Anti-Mycobacterium abscessus activity of tuberculosis F-ATP
synthase inhibitor GaMF1.
Antimicrob.
Agents and Chemother. 66, e0001822
-
Joon, S.,
Harikishore, A., Wong, C.-F., Ragunathan, P., Dick, T., and
Grüber, G.* (2022) Atomic solution structure of
Mycobacterium abscessus F-ATP synthase subunit ε and
identification of Ep1MabF1 as a targeted inhibitor.
FEBS J. in press
-
Saw, W.-G.,
Leow, C.Y., Harikishore, A., Shin, J., Cole, M., Aragaw, W.W.,
Ragunathan, P., Hegde, P., Aldrich, C.C., Dick, T., and
Grüber, G.* (2022) Structural and mechanistic insights
into Mycobacterium abscessus aspartate decarboxylase PanD and a
pyrazinoic acid-derived inhibitor.
ACS Infect. Dis.,
in press
|
|